You have to crack some nuts, yeah.
We will adjust accordingly. This might be true for season 1 - I would not be so sure though as most likely the legendary owners will also try to keep their Yamatos in a not so busy region.
But there is many ways how we can react:
Speed increase
A new super fast ship
WORM holes
Space stations
A ship that can transport other ships faster than they can get there themselves?
It takes forever to send explorers anywhere.
Could also be an interesting solution.